Insertion junction: CLIP2.046937_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.046937
Chromosome:chromosome 16
Location:831602
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g801884 (1 of 1) K19001 - ATP-dependent DNA helicase (HELLS, DDM1) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTTCGACTGCCGGCTGCTGCGCGAGATGCGGCAGCTCACCATGGAGTCGC
Internal bar code:TAACATTCGGCATTTTTGTTGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1099
LEAP-Seq percent confirming:64.2857
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:28

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACATCATGGCCTCCTG
Suggested primer 2:TTAGGACTAGCCCGGCTCTT