Insertion junction: CLIP2.046939_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.046939
Chromosome:chromosome 3
Location:6018506
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGTGTGGTTCACCGCGGCGGCCAGCCCCAAGCTGCTGCTAAAGGAGGTG
Internal bar code:ATTATATTTTCTTATGTAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:1392
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:7
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:7

Suggested primers for confirmation by PCR

Suggested primer 1:CAGGTTGAGCCAAGGAGGAG
Suggested primer 2:TGCTTTCTTGTGCGTTGACG