Insertion junction: CLIP2.046939_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046939
Chromosome:chromosome 3
Location:6018512
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g189700 (1 of 2) K07735 - putative transcriptional regulator (algH) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCACTCCATCGCCAGTTGCCCGGGCGCCCAGCCAGCGTATGCGCTGAAC
Internal bar code:ATTATATTTTCTTATGTAAACG

Confirmation - LEAP-Seq

LEAP-Seq distance:3485
LEAP-Seq percent confirming:77.2727
LEAP-Seq n confirming:34
LEAP-Seq n nonconfirming:10
LEAP-Seq n unique pos:44

Suggested primers for confirmation by PCR

Suggested primer 1:TGCTTTCTTGTGCGTTGACG
Suggested primer 2:CAGGTTGAGCCAAGGAGGAG