Insertion junction: CLIP2.046945_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046945
Chromosome:chromosome 13
Location:2577300
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g580550 HLM20 (1 of 2) K11426 - SET and MYND domain-containing protein (SMYD); putative N-methyltransferase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCACTGTGGGTGGCACTCTGGGGGCACTCTGGGGGGCACTCTGGGGGCA
Internal bar code:TGCAACAGTGTGCGTTGGGTCA

Confirmation - LEAP-Seq

LEAP-Seq distance:91
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGATCGAGATCTGCTGCC
Suggested primer 2:TGCACCCGTCTCTAAAACCC