Insertion junction: CLIP2.046953_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046953
Chromosome:chromosome 5
Location:156098
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g242500 PF1,RSP4 (1 of 2) PF04712 - Radial spokehead-like protein (Radial_spoke); Radial spoke protein 4 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAGGAGGTCCACCGCATTCTTTGGCTGGTCCTCCAGCACCTGCAGCACGC
Internal bar code:CATCGTCTTAATAGGTGCGATC

Confirmation - LEAP-Seq

LEAP-Seq distance:482
LEAP-Seq percent confirming:22.2222
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:45

Suggested primers for confirmation by PCR

Suggested primer 1:GTGTTCTCCCCTTCTCAGGC
Suggested primer 2:TATCTCCGTGCCTCACCTCA