Insertion junction: CLIP2.046957_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.046957
Chromosome:chromosome 2
Location:2744574
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g093850 (1 of 1) IPR000104//IPR000595//IPR001611//IPR003591//IPR018490 - Antifreeze protein, type I // Cyclic nucleotide-binding domain // Leucine-rich repeat // Leucine-rich repeat, typical subtype // Cyclic nucleotide-binding-like CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCGGCGTAATTGCGGCGATGGCGCGACCCTGGGGCCGAAACGCAGTAGA
Internal bar code:GCCTCAGTGAGATTTTCTTTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:3912
LEAP-Seq percent confirming:97.4359
LEAP-Seq n confirming:38
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:CCACAACCTGAACAAGCTGC
Suggested primer 2:CCTGCGTCTGGTGTACAAGT