Insertion junction: CLIP2.046961_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.046961
Chromosome:chromosome 7
Location:4859378
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g346300 (1 of 41) PTHR32523//PTHR32523:SF8 - FAMILY NOT NAMED // PHYTOL KINASE 1, CHLOROPLASTIC CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCGCTGCCGCCTCCGCGGTAGCTGCCGCCGCCACCGGCCCCGCTGCTGC
Internal bar code:TACTAATTTGAGGGTTCTCGGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2900
LEAP-Seq percent confirming:78.3333
LEAP-Seq n confirming:47
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:60

Suggested primers for confirmation by PCR

Suggested primer 1:ATTTGGGTGCCATAGGGGTG
Suggested primer 2:ATTGCAGTCGGAGAGCTTCC