Insertion junction: CLIP2.046963_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046963
Chromosome:chromosome 14
Location:2144903
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre14.g621800 GT90-27,GT90F27 GT90 family protein 27; (1 of 52) PF05686 - Glycosyl transferase family 90 (Glyco_transf_90) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCAAAAGCTGTGCGGGCAGGTAGAGTCGACGGTCCACGCCGACGAGTGG
Internal bar code:TAATTGCGCCACCTCCGGTGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:3110
LEAP-Seq percent confirming:89.0625
LEAP-Seq n confirming:57
LEAP-Seq n nonconfirming:7
LEAP-Seq n unique pos:64

Suggested primers for confirmation by PCR

Suggested primer 1:GCTACTGGTAAGCGCAATGC
Suggested primer 2:GGACTTGAGGTGACGAAGGG