Insertion junction: CLIP2.046974_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.046974
Chromosome:chromosome 8
Location:3115750
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g375850 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AACGTCGACAAACTTGCACACAGTGTCTGAGTTCAGTCGCTCAGTGGCTC
Internal bar code:GTTCGAATGCTTCTTGAGTTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:913
LEAP-Seq percent confirming:46.6667
LEAP-Seq n confirming:14
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:TTTTGGGCCAACATCGCTTG
Suggested primer 2:GCTCCAGCAGCGAGGTATAG