Insertion junction: CLIP2.046976_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.046976
Chromosome:chromosome 13
Location:2795119
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g582650 MAPK1,LF4 (1 of 1) K08830 - renal tumor antigen [EC:2.7.11.22] (RAGE, MOK); Mitogen-activated protein kinase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCCCCAGGTGGTACAGCCTTGCGCCCCTTGTCGCCCGCCCGTTTGCCCCT
Internal bar code:TGGCGCATGCACGGCGGTAAAC

Confirmation - LEAP-Seq

LEAP-Seq distance:246
LEAP-Seq percent confirming:86.6667
LEAP-Seq n confirming:13
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:GGGTGGGTCTTTCGTTACGT
Suggested primer 2:CCCGGCTCGTAGTATGTGTT