Insertion junction: CLIP2.046994_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.046994
Chromosome:chromosome 9
Location:4463422
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g400738 (1 of 1) PTHR23012//PTHR23012:SF96 - MEMBRANE ASSOCIATED RING FINGER // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GACTTGGTGGCCCTGGTATCCGGCCAGCTCCGAATCCCAGCCAGTCCCCC
Internal bar code:TGGAGCGTGTGATTCAATGATG

Confirmation - LEAP-Seq

LEAP-Seq distance:2541
LEAP-Seq percent confirming:59.7701
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:35
LEAP-Seq n unique pos:87

Suggested primers for confirmation by PCR

Suggested primer 1:CCCCGCTAAACCCCTGTAAG
Suggested primer 2:GAGTCTGGATGCAGTGGCTT