Insertion junction: CLIP2.047000_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047000
Chromosome:chromosome 3
Location:5080880
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g180200 (1 of 12) IPR001680//IPR015943//IPR017986 - WD40 repeat // WD40/YVTN repeat-like-containing domain // WD40-repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTGCCGTCGCCAGGCAGTACACGGCCCCCACGTGCGCCGCCCAGCTGCAG
Internal bar code:GCTTACAACGTGTATTGCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:2204
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:20
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:ACGGTTTTGATTGCAGGTGC
Suggested primer 2:TACGACCGACTTCAGACCCT