Insertion junction: CLIP2.047002_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047002
Chromosome:chromosome 11
Location:358000
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467576 (1 of 1) PTHR33403//PTHR33403:SF5 - FAMILY NOT NAMED // PROTEIN SPIRAL1-LIKE 2-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCTCAAACTATCTTCCCCTCCTTGACCTCTCGTTGTGCATCGCAGGCC
Internal bar code:GTTCCGTGGCAAGAGCTGGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:1489
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TAAACACCCGCAGTTACGCT
Suggested primer 2:GAGTCAGGGCTGCTTGTTCT