Insertion junction: CLIP2.047003_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047003
Chromosome:chromosome 2
Location:4039628
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g103050 (1 of 26) IPR013026//IPR019734 - Tetratricopeptide repeat-containing domain // Tetratricopeptide repeat intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGCGGCGGAGGTGCTGGCCAAGGGGCAGGCGCTGCTGGCCAAGCTGGGC
Internal bar code:GCGGGGTGCGGGTAGAGGGTTG

Confirmation - LEAP-Seq

LEAP-Seq distance:74
LEAP-Seq percent confirming:6.66667
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:14
LEAP-Seq n unique pos:15

Suggested primers for confirmation by PCR

Suggested primer 1:CATTAGCCCCTCACACAGCA
Suggested primer 2:AGGATGTTAGGAGACCGGCT