Insertion junction: CLIP2.047007_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047007
Chromosome:chromosome 12
Location:4513360
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g520950 BOP5,IDA-IC138,IC138,DIC4 Axonemal inner dynein arm I1 intermediate chain; (1 of 1) PTHR12442:SF12 - WD REPEAT-CONTAINING PROTEIN 78 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGCTCCAGAACGCCACCAGCCCGCGCGGCTCGTGGCCCGTGGTCTGCTGC
Internal bar code:TAAAGAGTTCTGTTTCTGCGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:3426
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:25
LEAP-Seq n nonconfirming:5
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTGTGGCTGAGAGCAACT
Suggested primer 2:GTATCGTCCAGTCGCCTGAG