Insertion junction: CLIP2.047012_2

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047012
Chromosome:chromosome 11
Location:791448
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g467633 (1 of 1) PTHR11918//PTHR11918:SF78 - RADICAL SAM PROTEINS // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGATGAGACATCGTATGATGTGACACTATCTGGTGCATGGCAGCATGGGC
Internal bar code:AGTGGAACGTGTTTGCGCCTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:908
LEAP-Seq percent confirming:95.8333
LEAP-Seq n confirming:23
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:TCGACTTCCCTTGACCAAGC
Suggested primer 2:AGGCCTCTTCGAACCAACAG