Insertion junction: CLIP2.047015_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047015
Chromosome:chromosome 5
Location:868136
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g246250 (1 of 12) IPR000104//IPR002893 - Antifreeze protein, type I // Zinc finger, MYND-type CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGGAGCGGCTGCATGGGCCGGTTGCTTGCGGGCTGATGGGGGCGGCGCTG
Internal bar code:GCGTGGTCTAGATAGCGTTAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:3522
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:24
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GGGGGAGGGAGTTGTTTCTG
Suggested primer 2:TAATTGCCCCGTTCGCTCTT