Insertion junction: CLIP2.047021_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047021
Chromosome:chromosome 12
Location:3875137
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g515250 ROC7 Rythm Of Chloroplast bioluminescence 7; (1 of 1) PF09758 - Uncharacterised conserved protein (FPL) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCCTTGGTCTGGCTCGATGGGCCAAACACAGGCGCAGCCTCAGGTAAGAG
Internal bar code:AGGATTATTGGCCGGTTGTGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1422
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGTGCCACCCAAGGTATG
Suggested primer 2:GCCACACAAACACGAGACAC