Insertion junction: CLIP2.047036_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047036
Chromosome:chromosome 9
Location:6755486
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g417250 ELG27 Exostosin-like glycosyltransferase 27; (1 of 34) 2.4.2.41 - Xylogalacturonan beta-1,3-xylosyltransferase / Xylogalacturonan xylosyltransferase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCGGCCGACCCATGGGCGACAGCTGCAAGCCCAACAGGGTGAGGCCAGG
Internal bar code:CTCTGGTCGTACCACGGCTGGT

Confirmation - LEAP-Seq

LEAP-Seq distance:1342
LEAP-Seq percent confirming:96.9697
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:33

Suggested primers for confirmation by PCR

Suggested primer 1:AGCTTCTCCTGCACCATTCC
Suggested primer 2:GCAAATGAGCCATAGCACCG