Insertion junction: CLIP2.047046_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047046
Chromosome:chromosome 8
Location:4188516
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre08.g383750 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GGATCTCAAGGAGCAGGTGAGTTGTTCTATCTGGCAGCTGGCAGGCATGT
Internal bar code:CATGTGGGGGGCTTCTGGGGTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2361
LEAP-Seq percent confirming:37.931
LEAP-Seq n confirming:11
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:29

Suggested primers for confirmation by PCR

Suggested primer 1:GCTATGATCGACCCACCCAG
Suggested primer 2:CAAAGCCCGGTTGGTCAAAG