Insertion junction: CLIP2.047047_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047047
Chromosome:chromosome 6
Location:8226631
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g306450 (1 of 2) 3.1.1.75 - Poly(3-hydroxybutyrate) depolymerase / Poly(HA) depolymerase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TCATAGCACTTGCCTACTGGTATGCGTTTGCCCTCCCTCACCAGCGCGCG
Internal bar code:GAAACCTTAATTCGTAGTGCCC

Confirmation - LEAP-Seq

LEAP-Seq distance:416
LEAP-Seq percent confirming:11.6279
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:38
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:GTATCCATCCCACGTGTCCC
Suggested primer 2:TCGTCGTCTTGTCTTCCTGC