Insertion junction: CLIP2.047055_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047055
Chromosome:chromosome 5
Location:3429732
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre05.g233304 CHI3 (1 of 2) K01183 - chitinase (E3.2.1.14); Chitinase-like hydrolase intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCTGATGCCCCGCATGTGCCAGGCCAATGCCAATACCCTGGAGACTGC
Internal bar code:GCTCTGGTCTAGATCTGTGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:920
LEAP-Seq percent confirming:91.6667
LEAP-Seq n confirming:22
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GCATAGGATCTCCCACTGCC
Suggested primer 2:GGCCTAGTGCAATGGGTGAT