Insertion junction: CLIP2.047074_2

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:+
Strain:CLIP2.047074
Chromosome:chromosome 16
Location:2626940
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g661300 THB10 (1 of 6) PTHR10681//PTHR10681:SF118 - THIOREDOXIN PEROXIDASE // SUBFAMILY NOT NAMED; Truncated hemoglobin 3'UTR

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACCCGTGGGAGAGCCCTGTGTACATGGAGATTGGGGTGTTTGGCAAGTCG
Internal bar code:GGGCCTGGAAGGGATTGTTGTT

Confirmation - LEAP-Seq

LEAP-Seq distance:2358
LEAP-Seq percent confirming:98.5507
LEAP-Seq n confirming:68
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:69

Suggested primers for confirmation by PCR

Suggested primer 1:CCCACAAACACGGAGCAAAG
Suggested primer 2:TAAGAGCTGCCCTTGAGCAC