Insertion junction: CLIP2.047078_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047078
Chromosome:chromosome 6
Location:3181280
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g276150 (1 of 274) IPR020683 - Ankyrin repeat-containing domain CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGTCGGCCCAGGACCCATCCGGCCTGGGACTACTGATGGCGCGCTGCAG
Internal bar code:ATGCTTGAAGGCTCGCCGGCTA

Confirmation - LEAP-Seq

LEAP-Seq distance:6502
LEAP-Seq percent confirming:96.2264
LEAP-Seq n confirming:51
LEAP-Seq n nonconfirming:2
LEAP-Seq n unique pos:53

Suggested primers for confirmation by PCR

Suggested primer 1:ACACAACCTGGACCATCGAC
Suggested primer 2:CGCACTCGTCAAGGAGGAAA