Insertion junction: CLIP2.047081_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047081
Chromosome:chromosome 13
Location:2785349
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g801538 (1 of 73) IPR000477//IPR005135 - Reverse transcriptase domain // Endonuclease/exonuclease/phosphatase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGTAACCTTATATCGTTCCTTGGCCTCTCGTCGCATGCGCTGGTACCGCG
Internal bar code:GCTAGTAGTTGACGACGGCAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3267
LEAP-Seq percent confirming:15.625
LEAP-Seq n confirming:5
LEAP-Seq n nonconfirming:27
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:CTGAAGGCGAGGACGAGATC
Suggested primer 2:GTCCGAAACGTCACCCTTCT