Insertion junction: CLIP2.047089_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047089
Chromosome:chromosome 2
Location:3948984
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre02.g102300 (1 of 1) PTHR31013 - THAUMATIN FAMILY PROTEIN-RELATED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTTGTACGGCAGGTTTCCGACCCGCCCCGCCCCCCTTCTTCCTGCGCACC
Internal bar code:CTATATCCCCTCCGCAGCTCTT

Confirmation - LEAP-Seq

LEAP-Seq distance:6182
LEAP-Seq percent confirming:93.617
LEAP-Seq n confirming:44
LEAP-Seq n nonconfirming:3
LEAP-Seq n unique pos:47

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGGGGTTGACTGATTCT
Suggested primer 2:GTCATCCCTACCCTACCCGT