Insertion junction: CLIP2.047096_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:+
Strain:CLIP2.047096
Chromosome:chromosome 2
Location:2977920
Confidence (%):40
Locus systematic id Locus common name Defline Feature
Cre02.g095350 DNK1,CGL116 Conserved in the Green Lineage; (1 of 1) PTHR10513 - DEOXYNUCLEOSIDE KINASE intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGCCGCCCCTCTCCACAGCCGCCCCTCTCCACTGCCGCCCCTCTCCACT
Internal bar code:AGCAGCTTATCGGCCATAGTGA

Confirmation - LEAP-Seq

LEAP-Seq distance:125
LEAP-Seq percent confirming:30.7692
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:13

Suggested primers for confirmation by PCR

Suggested primer 1:GCCAAGCGAAAATAGCGGAG
Suggested primer 2:CCACTCCACCCCAATACCAC