Insertion junction: CLIP2.047102_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047102
Chromosome:chromosome 12
Location:1722775
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g486208 Found in Cr and Volvox but not strongly conserved elsewhere CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTGAAACGTGAGCGCAGCTTTGAAGCATCCGCGGGCGCCTCGGCCGGCGC
Internal bar code:TGACCTTGCCTTTTACGCATTA

Confirmation - LEAP-Seq

LEAP-Seq distance:1668
LEAP-Seq percent confirming:83.3333
LEAP-Seq n confirming:45
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:54

Suggested primers for confirmation by PCR

Suggested primer 1:ACCCCTGGTTATTCGCGTTT
Suggested primer 2:GGAGAGTGGAGAGGGAGTGT