Insertion junction: CLIP2.047103_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047103
Chromosome:chromosome 6
Location:5493311
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g286350 UMM6 UbiE/COQ5 methyltransferase family protein; (1 of 2) PTHR10108//PTHR10108:SF830 - METHYLTRANSFERASE // SUBFAMILY NOT NAMED intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCGCCCTCTATCTCCAATCCGCGACCGCCCTGGCTCCTGCCTCGGCTG
Internal bar code:TTCGTCCCCAAGGGCCCAGCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:3169
LEAP-Seq percent confirming:87.8378
LEAP-Seq n confirming:65
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:74

Suggested primers for confirmation by PCR

Suggested primer 1:GAGTCTCCCACCGAGGTAGT
Suggested primer 2:AGCACCACCGCATTGTATCA