Insertion junction: CLIP2.047106_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047106
Chromosome:chromosome 1
Location:6038190
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g042650 (1 of 17) PF13202 - EF hand (EF-hand_5) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGACTGTATCTTCGGACGGCAAGCTGGTGTCTCGCACCTCCAACAGCACC
Internal bar code:ATTGCGTTGTTTCCGAAGGTGG

Confirmation - LEAP-Seq

LEAP-Seq distance:2426
LEAP-Seq percent confirming:55.5556
LEAP-Seq n confirming:15
LEAP-Seq n nonconfirming:12
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:GGTCAGGGCACTTCATGACA
Suggested primer 2:TGCTGTGTGATTGTTGCGTG