Insertion junction: CLIP2.047107_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047107
Chromosome:chromosome 6
Location:5080193
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g282450 PFH18,PHX11 (1 of 1) PTHR10869//PTHR10869:SF91 - PROLYL 4-HYDROXYLASE ALPHA SUBUNIT // SUBFAMILY NOT NAMED; Putative prolyl 4-hydroxylase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CACGGTCGCCCACTGGGGACGGCGCGGGCGGCGCAGCAGCAGCAGCAGCA
Internal bar code:TCGGTGTTTAGAGTATTGCCAA

Confirmation - LEAP-Seq

LEAP-Seq distance:841
LEAP-Seq percent confirming:18.1818
LEAP-Seq n confirming:2
LEAP-Seq n nonconfirming:9
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:CTTCCCTTACCATGGCTGCA
Suggested primer 2:GCACCAGCATCACGTCAAAC