Insertion junction: CLIP2.047111_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047111
Chromosome:chromosome 1
Location:5481829
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre01.g038800 MIP3 (1 of 1) K09875 - aquaporin SIP (SIP); Major intrinsic protein superfamily intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GCGGGGTGGTTATGTAACCGTTCTACCGACACGGTCTGTAGCACTAGGGC
Internal bar code:ATCGGATACCGAAAGACGCCCA

Confirmation - LEAP-Seq

LEAP-Seq distance:191
LEAP-Seq percent confirming:5.88235
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:17

Suggested primers for confirmation by PCR

Suggested primer 1:TGGTGTCAGCAACTTGGTGT
Suggested primer 2:TACCACGAACGGGTTCAGTG