Insertion junction: CLIP2.047113_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047113
Chromosome:chromosome 6
Location:3550676
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278124 (1 of 1) PTHR12894//PTHR12894:SF10 - CNH DOMAIN CONTAINING // VAM6/VPS39-LIKE PROTEIN CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGTGACAGATGGAGCACGCCCGCTCGCCCGTCACCAGCACGCGCTGCTGC
Internal bar code:AGAAACTCTAAGCTAAGAAATA

Confirmation - LEAP-Seq

LEAP-Seq distance:1449
LEAP-Seq percent confirming:96.2963
LEAP-Seq n confirming:26
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:27

Suggested primers for confirmation by PCR

Suggested primer 1:TTGGGGAAGGGGAGAGGTAG
Suggested primer 2:CGAACTCGCCAGCTAGCATA