Insertion junction: CLIP2.047117_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047117
Chromosome:chromosome 11
Location:3368207
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre11.g476900 (1 of 1) PTHR12465//PTHR12465:SF0 - UBIQUITIN SPECIFIC PROTEASE HOMOLOG 49 // MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 20 intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAAGCAACTCGTGTCAACGGCGCTAGAACAGCAGTGCGCAGAGCCGAAGC
Internal bar code:CTAGGGTTAGCGTTCGGACCGG

Confirmation - LEAP-Seq

LEAP-Seq distance:880
LEAP-Seq percent confirming:84.2105
LEAP-Seq n confirming:32
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:38

Suggested primers for confirmation by PCR

Suggested primer 1:GCGACGTTTTCCTTGTGCTT
Suggested primer 2:ACACCACTCGGCGAATTCAT