Insertion junction: CLIP2.047120_1

Overview

Insertion cassette:CIB2
Side of cassette:3' truncated?
Strand:-
Strain:CLIP2.047120
Chromosome:chromosome 6
Location:3495793
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre06.g278111 (1 of 6) IPR000595//IPR005821//IPR018490 - Cyclic nucleotide-binding domain // Ion transport domain // Cyclic nucleotide-binding-like intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCGGCCGTCGGCGCTGATTGTGTCTGCTCTCCAGGCCGCTGTTCTAA
Internal bar code:TTGAACGAACCCTGGATGAAGA

Confirmation - LEAP-Seq

LEAP-Seq distance:2515
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:43
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:43

Suggested primers for confirmation by PCR

Suggested primer 1:TCAGGCACGATACGGCATAC
Suggested primer 2:CTTGTCGGTGTTGGGCTTTG