Insertion junction: CLIP2.047122_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047122
Chromosome:chromosome 17
Location:2124331
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre17.g711650 NUD1,NUDC1,NUDC (1 of 4) IPR007052//IPR008978 - CS domain // HSP20-like chaperone; Nuclear distribution/movement family protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGAGCATAGAGGACCCGAGCAAGCGCAAGCTGCGTGGGCGCGTGTCGGCC
Internal bar code:CTTGCCGGGCGCGTGCGTGGAT

Confirmation - LEAP-Seq

LEAP-Seq distance:3980
LEAP-Seq percent confirming:84.6154
LEAP-Seq n confirming:33
LEAP-Seq n nonconfirming:6
LEAP-Seq n unique pos:39

Suggested primers for confirmation by PCR

Suggested primer 1:TAAGCGCCTCGTGATGTTGT
Suggested primer 2:GTTGACAGTGACCTCGCTCA