Insertion junction: CLIP2.047124_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047124
Chromosome:chromosome 12
Location:8817358
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre12.g546800 PHC53 Putative pherophorin-chlamydomonas homolog; (1 of 71) PF12499 - Pherophorin (DUF3707) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TGCGCACACCGCCCGGCATCCTCCTGCCCCAGCCCCTTGACTGTAGGTTT
Internal bar code:TCGGCGACTCTGGAACCATAGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1714
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:52
LEAP-Seq n nonconfirming:13
LEAP-Seq n unique pos:65

Suggested primers for confirmation by PCR

Suggested primer 1:CGCTGACGCTGATAAAACCG
Suggested primer 2:GGGGTGCTTTGCTCACTTTG