Insertion junction: CLIP2.047125_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047125
Chromosome:chromosome 5
Location:1564687
Confidence (%):80
Locus systematic id Locus common name Defline Feature
lncRNA_TCONS_00214382

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): GTCTGATCAACTCCTACGACGGGAATAGCGACATCTCCGGCCGGAGTCTG
Internal bar code:GGTGTTTTATTCAGAGGTGGAA

Confirmation - LEAP-Seq

LEAP-Seq distance:653
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:2

Suggested primers for confirmation by PCR

Suggested primer 1:TGCCAGGGTGGATGAGGATA
Suggested primer 2:CGAGACCGTGATGACTACCG