Insertion junction: CLIP2.047131_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047131
Chromosome:chromosome 15
Location:341368
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g635400 ZYS3,ZYS3-1 (1 of 3) PTHR24193//PTHR24193:SF87 - ANKYRIN REPEAT PROTEIN // SUBFAMILY NOT NAMED; Zygote-specific protein intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCATGACATGAGTTCTGCACATCACAGCCCTCACAGCCCGACACGGCCTG
Internal bar code:TTGGTCTCGCAGATGCGATGCA

Confirmation - LEAP-Seq

LEAP-Seq distance:2098
LEAP-Seq percent confirming:75.5396
LEAP-Seq n confirming:105
LEAP-Seq n nonconfirming:34
LEAP-Seq n unique pos:139

Suggested primers for confirmation by PCR

Suggested primer 1:AAGGGGTTGACCGTGTGTTT
Suggested primer 2:CTGGCATGTCAGGATGTCGT