Insertion junction: CLIP2.047145_2

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047145
Chromosome:chromosome 16
Location:2895564
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g663250 (1 of 781) IPR000104 - Antifreeze protein, type I intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): TTCCTTGGTGGACGGGTGCTGACACCGCTCTTGCTTGCGCTGGTCAGCTT
Internal bar code:AGGGAGCAGTGTTCACCGGTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:308
LEAP-Seq percent confirming:5.26316
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:18
LEAP-Seq n unique pos:19

Suggested primers for confirmation by PCR

Suggested primer 1:GTTGGAGGCGACAACTGAGA
Suggested primer 2:CCGTGTTGCCGCAACTTTAA