Insertion junction: CLIP2.047147_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047147
Chromosome:chromosome 9
Location:5215399
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g406950 (1 of 5) IPR000104//IPR016024 - Antifreeze protein, type I // Armadillo-type fold intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTGTGTGTGCGTTTGGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTG
Internal bar code:AAGAAGAAAGTGTCCACCTTAG

Confirmation - LEAP-Seq

LEAP-Seq distance:287
LEAP-Seq percent confirming:2.08333
LEAP-Seq n confirming:1
LEAP-Seq n nonconfirming:47
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:GACTTGTTGACGGTGGTTGC
Suggested primer 2:ACCTATCCCTACCCCAACCC