Insertion junction: CLIP2.047155_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047155
Chromosome:chromosome 3
Location:8365559
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre03.g800397 (1 of 1) K18735 - protein SMG9 (SMG9) CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CGCAGCAGGCGGGCGCGAGGGAGCAGGTGTTGGCCACATAGCAGGTCTTC
Internal bar code:AGCTTAATGAACCATGTCGAGC

Confirmation - LEAP-Seq

LEAP-Seq distance:2430
LEAP-Seq percent confirming:96.875
LEAP-Seq n confirming:31
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:32

Suggested primers for confirmation by PCR

Suggested primer 1:TTCCTTCCTTGCGCTCTCAG
Suggested primer 2:CGAAGGAACATGTTAGCGCG