Insertion junction: CLIP2.047159_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047159
Chromosome:chromosome 15
Location:902738
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre15.g640100 (1 of 58) PTHR12393//PTHR12393:SF6 - SPHINGOMYELIN PHOSPHODIESTERASE RELATED // SPHINGOMYELIN PHOSPHODIESTERASE 2 CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AAGCAGCACGTGCGGGCCAGGTGGGGCTCTTCGAAGAGCTGCTGACGCGG
Internal bar code:CCATCCCCCTAGTTTAGTGTTA

Confirmation - LEAP-Seq

LEAP-Seq distance:2118
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:48
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:48

Suggested primers for confirmation by PCR

Suggested primer 1:ACACACAGCTGACTCACTCG
Suggested primer 2:AGCGTCGTTTGCAGAACCTA