Insertion junction: CLIP2.047163_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047163
Chromosome:chromosome 15
Location:1693694
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre19.g750947 (1 of 11) IPR001471//IPR016177//IPR031112 - AP2/ERF domain // DNA-binding domain // AP2-like ethylene-responsive transcription factor CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CAACGAGAAGAAATTCTCAAACACGGCACGAAAGCTGTGGCCGTGTCATC
Internal bar code:ACGTTGGATTGTACAAATGTCC

Confirmation - LEAP-Seq

LEAP-Seq distance:914
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:30
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:30

Suggested primers for confirmation by PCR

Suggested primer 1:AAGAAAGGCCGTCGAAGGAG
Suggested primer 2:GGGAAAGATGGGGGCATGAA