Insertion junction: CLIP2.047172_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047172
Chromosome:chromosome 10
Location:3895208
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre10.g446450 (1 of 1) PTHR26402:SF316 - TRANSCRIPTIONAL REGULATORY PROTEIN CUSR intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CTCAGGCCCCCAGCCCTCCCGCACAAAGCAGAACGCCCACCTCTGCGCTC
Internal bar code:TAGGTATCCACAACTGTGTCAT

Confirmation - LEAP-Seq

LEAP-Seq distance:1388
LEAP-Seq percent confirming:80.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:5

Suggested primers for confirmation by PCR

Suggested primer 1:AGGGACCATCCAGGCAGTAT
Suggested primer 2:CGAACGCACCAAAACTCGTT