Insertion junction: CLIP2.047173_1

Overview

Insertion cassette:CIB2
Side of cassette:3'
Strand:-
Strain:CLIP2.047173
Chromosome:chromosome 7
Location:316176
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre07.g314300 (1 of 1) PF07092 - Protein of unknown function (DUF1356) (DUF1356) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCCCAAGCACAGGACCCCACTGACGTTCTTTGCACCGTTGTGCATACAC
Internal bar code:GTCTGGACTATTCGGTAGGTCG

Confirmation - LEAP-Seq

LEAP-Seq distance:575
LEAP-Seq percent confirming:90.9091
LEAP-Seq n confirming:10
LEAP-Seq n nonconfirming:1
LEAP-Seq n unique pos:11

Suggested primers for confirmation by PCR

Suggested primer 1:ACCTGACAGCCTCTCCATCT
Suggested primer 2:ATCCAGCACCAACCTCACTG