Insertion junction: CLIP2.047174_1

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:+
Strain:CLIP2.047174
Chromosome:chromosome 16
Location:5811007
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre16.g680050 DRT2 DRAP1-like protein; (1 of 1) PTHR10252:SF5 - DR1-ASSOCIATED COREPRESSOR intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): AGACAGACCCAAGCACGCGTGGTGCCCCGGGCATGGCAACAGCCAGTGCT
Internal bar code:TAAGGCAGGATCCTGTAAAGTG

Confirmation - LEAP-Seq

LEAP-Seq distance:633
LEAP-Seq percent confirming:33.3333
LEAP-Seq n confirming:8
LEAP-Seq n nonconfirming:16
LEAP-Seq n unique pos:24

Suggested primers for confirmation by PCR

Suggested primer 1:GATGACAGCCTCGTAGACGG
Suggested primer 2:CTACAGCACTCCAGTGGGTG