Insertion junction: CLIP2.047199_2

Overview

Insertion cassette:CIB2
Side of cassette:5'
Strand:-
Strain:CLIP2.047199
Chromosome:chromosome 9
Location:6060583
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g412700 (1 of 3) PF01541 - GIY-YIG catalytic domain (GIY-YIG) intron

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): ACAACGGCCAGGGCGGCCGGCCCACCCCTACTGCTGCGCGTCATGTCGGC
Internal bar code:GCTATATAGACTGGAAAGCATA

Confirmation - LEAP-Seq

LEAP-Seq distance:4317
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:111
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:111

Suggested primers for confirmation by PCR

Suggested primer 1:GACCGCCCTGCATAGTCTAC
Suggested primer 2:CGAAGCTTTGGTGTGTGCAA