Insertion junction: CLIP2.047202_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:-
Strain:CLIP2.047202
Chromosome:chromosome 9
Location:4828424
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre09.g402589 (1 of 22) PTHR11017//PTHR11017:SF145 - LEUCINE-RICH REPEAT-CONTAINING PROTEIN // SUBFAMILY NOT NAMED CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CATCTGCAGCACCTCCCGCACCGCGCCGCAGAACACCGCCCCGCTGCGCT
Internal bar code:AAGGGCTGTATACATGCTTGAG

Confirmation - LEAP-Seq

LEAP-Seq distance:738
LEAP-Seq percent confirming:100.0
LEAP-Seq n confirming:18
LEAP-Seq n nonconfirming:0
LEAP-Seq n unique pos:18

Suggested primers for confirmation by PCR

Suggested primer 1:ATGTAGCAAATTGGCCCCCA
Suggested primer 2:CTCTGGAATCGCAGGGTTGT