Insertion junction: CLIP2.047207_1

Overview

Insertion cassette:CIB2
Side of cassette:5' truncated?
Strand:+
Strain:CLIP2.047207
Chromosome:chromosome 13
Location:1243206
Confidence (%):80
Locus systematic id Locus common name Defline Feature
Cre13.g570400 (1 of 3) 3.1.1.14 - Chlorophyllase CDS

Insertion site details

Expected flanking sequence (starting at cassette; orientation from cassette outwards): CCCTGAGCTACAGCCTCAAGGGTTTTGAGCCCCTGGGCGCGGCGGGCAGC
Internal bar code:TGGTACGTATTTTGCCACCGGG

Confirmation - LEAP-Seq

LEAP-Seq distance:1393
LEAP-Seq percent confirming:50.0
LEAP-Seq n confirming:4
LEAP-Seq n nonconfirming:4
LEAP-Seq n unique pos:8

Suggested primers for confirmation by PCR

Suggested primer 1:CAGTCACTGCTTGGCTCTGA
Suggested primer 2:TGCATGCATGTGTGTTGGTG